Abstract
considerably influenced by factors such as geology, topography, climate and anthropogenic activities. It includes not only
biological factors but also physical chemical factors. The physical and chemical parameters can affect the bioavailability
of nutrients as wells as contaminants to plants and dependent animals. Monitoring the types and quantities of toxic
substances entering into the terrestrial environment is difficult due to the complexity and cost of procedures involved. Also
the determination of isolated substances by chemical assay does not detect the effects on the organisms neither inform
about the possible interactions between the substances (additive, antagonistic or synergistic).In this sense, researchers
have pointed the necessity to apply biological methodologies in order to obtain an ecosystemic approach. Biological
factors may indicate better interactive analysis, along with the possible role in the environmental balance through the biotic
indexes, derived from the observation of bioindicator species. Therefore our attempt in this study is to review different types
of biomarkers as early and sensitive indicators of soil stress.
Keywords
References
Magdoff F. and Weil, R.R. (2004). Soil Organic Matter in Sustainable Agriculture. Boca Raton, FL: CRC Press; p. 398.
Doran, W. and Parkin, T.B. (1996). Quantitative indicators of soil quality: a minimum data set. In: Doran JW and Jones AJ (eds): In: Methods for Assessing Soil Quality. SSSA, Inc., Madison, Wisconsin, USA; p. 2537.
Ke, P.J., Miki, T. and Ding, T.S. (2015). The soil microbial community predicts the importance of plant traits in plant-soil feedback. New Phytol 206(1):329–41.
Alvarez, R. and Alvarez, C.R. (2000). Soil organic matter pools and their associations with carbon mineralization kinetics. Soil Sci Soc Am. J 64:184–9.
Klute, A. (1965). In: Black CA (ed): Methods of Soil Analysis, Part 1. Physical and Mineralogical Properties, Including statistics of Measurement and Sampling. ASA-SSSA, Agronomy Monograph 9; pp. 273–8.
Lowery, B., Arshad, M.A., Lal, R. and Hickey, W.J. (1996). Soil water parameters and soil quality. In: Doran JW and Jones AJ (eds): Methods for Assessing Soil Quality. Madison, WI: SSSA; pp. 143–57.
Oliver, D.P., Bramley, R.G.V., Riches, D., Porter, I. and Edwards, J. (2013). Review: soil physical and chemical properties as indicators of soil quality in Australian viticulture. Australian Journal of Grape and Wine Research 19:129–39.
Heil, D. and Sposito, G. (1997). Chemical attributes and processes affecting soil quality. In: Gregorich EG and Carter MR (eds): Soil quality for Crop Production and Ecosystem Health. New York, NY: Elsevier; pp. 59–79.
Anderson, T. (2003). Microbial eco-physiological indicators to asses soil quality. Agriculture Ecosystems and Environment 98:285–93.
Bastida, F.Z.A., Hernandez, H. and Garcia, C. (2008). Past, present and future of soil quality indices: a biological perspective. Geoderma 47:159–71.
Martinez-Salgado, M.M., Gutiérrez-Romero, V., Jannsens, M. and Ortega-Blu, R. (2010). Biological soil quality indicators: a review. In: Mendez Vilas A (ed): Current Research, Technology and Microbiology and Microbial Biotechnology. Spain: Formatex Research Center; pp. 319–28.
Parkinson, D. and Coleman, D. (1991). Microbial communities, activity and biomass. Agriculture Ecosystems and Environment 34:3–33.
Bloem, J., de Ruiter, P. and Bouwman, L.A. (1994). Soil food webs and nutrient cycling in agroecosystems. In: van Elsas JD, Trevors JT, Wellington HME (eds): Modern Soil Microbiology. New York: Marcel Dekker; pp. 245–78.
Bloem, J. and Breure, A.M. (2003). Microbial indicators. In: Markert BA, Breure AM, Zechmeister HG (eds): Bioindicators and Iomonitors. Oxford: Elsevier; pp. 259–82.
Kennedy, P. and Smith, K.L. (1995). Soil microbial diversity and sustainability of agricultural soils. Plant Soil 170:75–86.
Pankhurst, C.E., Hawke, B.G., MacDonald, H.J., Kirkby, C.A., Buckerfield, J.C. and Michelsen, P. et al. (1995). Evaluation of soil biological properties as potential bioindicators of soil health. Aus J Exp Agric 35:1015–28.
Baldrian, P. (2009). Microbial enzyme-catalyzed processes in soils and their analysis Plant Soil Environ 9:370–8.
Dick, R. (1996). Soil enzyme activities as integrative indicators of soil health. In: Doran J, Jones A (ed): Methods for Assessing Soil Quality. Madison, Wisconsin: Soil Science Society of America, Inc.; p. 121–56.
Nair, P., Laxman, N., Prabha, S., Jagannath, M. and Kale, R.D. (2009). Comparison of soil enzyme activities as biochemical fingerprints of soil health. Dynamic Soil, Dynamic Plant 3(1):48–54
Utobo, E.B. and Tewari, L. (2015). Soil enzymes as bioindicators of soil ecosystem. Applied Ecology and Environmental Research 13(1):147–69.
Bowles, T.M., Acosta-Martínez, V., Calderón, F. and Jackson, L.E. (2014). Soil enzyme activities, microbial communities, and carbon and nitrogen availability in organic agroecosystems across an intensively-managed agricultural landscape. Soil Biology & Biochemistry 68:252–62.
Neher, D.A. (2001). Role of nematodes in soil health and their use as indicators. Journal of Nematology 33(4):161–8.
Nannipieri, P., Grego, S. and Ceccanti, B. (1990). Ecological significance of the biological activity in soil. In: Bollag JM and Stotzky G (eds): Soil Biochemistry, Vol. 6. New York, NY: Marcel Dekker; pp. 293–355.
Saly, A. and Ragala, P. (1984). Free-living nematodes-bioindicators of the effects of chemization on the soil fauna. Sborn?´k U´ vtiz Ochrana Rostlin 20:15–21.
Hashmi, G., Hashmi, S., Selvan, S., Grewal, P. and Gaugler, R. (1997). Polymorphism in heat shock protein gene (hsp70) in entomopathogenic nematodes (Rhabditida). Journal of Thermal Biology 22:143–9.
Kammenga, J.E., Arts, M.SJ. and Oude-Breuil, W.J.M. (1998). HSP60 as a potential biomarker of toxic stress in the nematode Plectus acuminatus. Archives of Environmental Contamination and Toxicology 34:253–8.
Kammenga, J.E., Dallinger, R., Donker, M.H., Kohler, H.R., Simonsen, V., Triebskorn, R. and Weeks, J.M. (2000). Biomarkers in terrestrial invertebrates for ecotoxicological soil risk assessment. Reviews of Environmental Contamination and Toxicology 164:93–147.
Markert, B.A., Breure, A.M. and Zechmeister, H.G. (2003). Definition, strategies and principles for bioindication/biomonitoring of the environment. In: Markert et al. (eds): Bioindicators and Biomonitors. Trace Metals and other Contaminants in the Environment. Amsterdam: Elsevier; pp. 3–40.
Heinz-Christian Fründ, Ulfert Graefe, Sabine Tischer. (2010). Earthworms as bioindicators of soil quality. In: A (ed): Biology of Earthworms, Chapter 16. Berlin: Springer-Verlag Heidelberg; pp. 261–78.
Bartlett, M., Briones, M., Neilson, R., Schmidt, O., Spurgeon, D. and Creamer, R. (2010). A critical review of current methods in earthworm ecology: from individuals to populations. European Journal of Soil Biology 16(2):67–73.
Lapied, E., Nahmani, J. and Rousseau, G. (2009). Influence of texture and amendments on soil properties and earthworm communities. Applied Soil Ecology 43(2–3):241–9.
Dick W. (1983). Organic carbon, nitrogen, and phosphorus concentrations and pH in soil profiles as affected by tillage intensity. Soil Science Society of American Journal 47:102–7.
Edwards, C.A. and Lofty, J.R. (1982). The effect of direct drilling and minimal cultivation on earthworm populations. Journal of Applied Ecology 19:723–34.
Mackay, A. and Kladivko, E. (1985). Earthworms and rate of breakdown of soybean and maize residues in soil. Soil Biology and Biochemistry 17:851–7.
Cikutovic, M.A, Fitzpatrick, L.C., Goven, A.J., Venables, B.J., Giggleman, M.A. and Cooper, E.L. (1999). Wound healing in earthworms Lumbricus terrestris: a cellularbased biomarker for assessing sublethal chemical toxicity. Bulletin of Environmental Contamination and Toxicology 62:508–14.
Bunn, K., Thompson, H. and Tarrant, K. (1996). Effects of agrochemicals on the immune systems of earthworms. Bulletin of Environmental Contamination and Toxicology 57:632–9.
Novais, S.C., Gomes, S.I.L., Gravato, C., Guilhermino, L., De Coen, W., Soares, A.M.V.M. and Amorim, M.J.B. (2011). Reproduction and biochemical responses in Enchytraeus albidus (Oligochaeta) to zinc or cadmium exposures. Environmental Pollution 159(7):1836–43.
Shay, J.W. and Wright, W.E. (2000). The use of telomerized cells for tissue engineering. Nat Biotech 8:22–3.
Steinhoff, G., Stock, U., Karim, N., Mertsching, H., Timke, A.,Meliss, R.R. and Bader, A. (2000). Tissue engineering of pulmonary heart valves on allogenic acellular matrix conduits in vivo restoration of valve tissue. Circulation 102:Iii50–Iii55.
Vidya, J., Kale, R.D. and Nair, P. (2012). Muscle cells as models to study anthelminitic properties of plant extracts. International Journal of Research in Pharmaceutical and Biomedical Sciences 3(2):l.
Nogarol, L.R. and Fontanetti, C.S. (2010). Acute and subchronic exposure of diplopods to substrate containing sewage mud: tissular responses of the midgut. Micron 41(3):239–46.
Dallinger, R. (1993). Strategies of metal detoxification in terrestrial invertebrates, In: (eds): Ecotoxicology of Metals in Invertebrates. Boca Raton: Lewis Publishers; pp. 245–89.
Calisi, A., Lionetto, M.G., Caricato, R., Giordano, M.E. and Schettino, T. (2008). Morphometrical alterations in Mytilus galloprovincialis granulocytes: a new potential biomarker. Environmental Toxicology and Chemistry 27(6):1435–41.
Cooper, E., Kauschke, E. and Cossarizza, A. (2002). Digging for innate immunity since Darwin and Metchnikoff. Bio Essays 24(4):319–33.
Hamed, S.S., Kauschke, E. and Cooper, E.L. (2002). Cytochemical properties of earthworm coelomocytes enriched by Percoll. In: Beschin A, Bilej M, Cooper EL (eds): A New Model for AnalyzingAntimicrobial Peptides with Biomedical Applications. Tokyo, Japan: IOS Press; pp. 29–37.
Madhusudhan, N., Nair, P. and Kale, R.D. (2009). Isolation and culture of coelomocytes Dynamic Soil, Dynamic Plant 3(Special Issue 2):111–4.
Affar, E.B., Dufour, M., Poirier, G.G. and Nadeau, D. (1998). Isolation, purification and partial characterization of chloragocytes from the earthworm species Lumbricus terrestris. Molecular and Cellular Biochemistry 185(1–2):123–33.
Riches, D., Porter, I.J., Oliver, D.P., Bramley, R.G.V., Rawnsley, B., Edwards, J. and White, R.E. (2013). Review: soil biological properties as indicators of soil quality in Australian viticulture.
Australian Journal of Grape and Wine Research 19(3):311–23. 49. Hill, G.T., Mitkowski, N.A., Aldrich-Wolfe, L., Emele, L.R., Jurkonie, D.D., Ficke, A. et al. (2000). Methods for assessing the composition and diversity of soil microbial communities. Applied Soil Ecology 15:25–36.
Van Elsas, J.D. and Boersma, F.G.H. (2011). A review of molecular methods to study the microbiota of soil and the mycosphere. European Journal of Soil Biology 47: 77–87.
Smith, B.A., Greenberg, B. and Stephenson, G.L. (2010). Comparison of biological and chemical measures of metal bioavailability in field soils: test of a novel simulated earthworm gut extraction. Chemosphere 81(6):755–66.
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